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Cofit
Protein
Homologs
Top cofit genes for mRNA_4274 from
Rhodosporidium toruloides IFO0880
12642
:
K01720 prpD 2-methylcitrate dehydratase
SEED: 2-methylcitrate dehydratase (EC 4.2.1.79)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5534
13902
K18798 AFG1, LACE1 peroxisome-assembly ATPase
no
0.84
2
mRNA
_4808
13176
K12880 THOC3 THO complex subunit 3
no
0.78
3
mRNA
_5794
14162
K01637 E4.1.3.1, aceA isocitrate lyase
no
0.76
4
mRNA
_4114
12482
HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522
no
0.72
5
mRNA
_1794
10162
BLAST peroxisomal membrane anchor protein [Aspergillus ...
no
0.71
6
mRNA
_595
8963
KOG0137 Very-long-chain acyl-CoA dehydrogenase
no
0.69
7
mRNA
_5815
14183
KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
no
0.68
8
mRNA
_7585
15953
K03650 mnmE, trmE, MSS1 tRNA modification GTPase
no
0.68
9
mRNA
_1891
10259
K03083 GSK3B glycogen synthase kinase 3 beta
no
0.68
10
mRNA
_1122
9490
BLAST glycoside hydrolase family 28 protein [Tulasnella cal...
no
0.68
11
mRNA
_5137
13505
K13342 PEX5, PXR1 peroxin-5
no
0.67
12
mRNA
_3005
11373
K19708 PTC6, AUP1 protein phosphatase PTC6
no
0.67
13
mRNA
_3786
12154
K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+)
no
0.67
14
mRNA
_5693
14061
KOG4186 Peroxisomal biogenesis protein (peroxin)
no
0.66
15
mRNA
_6441
14809
K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit
no
0.65
16
mRNA
_5036
13404
Hypothetical Protein
no
0.65
17
mRNA
_8410
16778
K12761 SNF1 carbon catabolite-derepressing protein kinase
no
0.65
18
mRNA
_7021
15389
K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase
no
0.65
19
mRNA
_1701
10069
K03522 fixB, etfA electron transfer flavoprotein alpha subunit
no
0.64
20
mRNA
_1066
9434
KOG1383 Glutamate decarboxylase/sphingosine phosphate lyase
no
0.64