Top cofit genes for mRNA_4461 from Rhodosporidium toruloides IFO0880

12829: SUPERFAMILY--SSF52047

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4023 12391 K01061 E3.1.1.45 carboxymethylenebutenolidase no 0.84
2 mRNA_7548 15916 K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4 no 0.81
3 mRNA_2427 10795 Hypothetical Protein no 0.80
4 mRNA_2919 11287 BLAST Protein FAM186A [Mus musculus] [Rhizoctonia solani] no 0.75
5 mRNA_4986 13354 K17943 PUM pumilio RNA-binding family no 0.75
6 mRNA_7324 15692 K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase no 0.74
7 mRNA_2432 10800 K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20 no 0.73
8 mRNA_3938 12306 HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482 no 0.72
9 mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 no 0.72
10 mRNA_6212 14580 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.71
11 mRNA_5479 13847 KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing no 0.71
12 mRNA_4434 12802 Hypothetical Protein no 0.71
13 mRNA_2806 11174 Hypothetical Protein no 0.71
14 mRNA_7520 15888 K18725 POM152 nucleoporin POM152 no 0.70
15 mRNA_6993 15361 HMMPfam-Protein of unknown function (DUF455)-PF04305,ProSiteProfiles-Rieske [2Fe-2S] iron-sulfur domain profile.-PS51296,SUPERFAMILY--SSF47240,SUPERFAMILY--SSF50022 no 0.70
16 mRNA_1265 9633 K14861 URB1 nucleolar pre-ribosomal-associated protein 1 no 0.70
17 mRNA_3451 11819 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.70
18 mRNA_3928 12296 HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486 no 0.69
19 mRNA_2539 10907 Hypothetical Protein no 0.69
20 mRNA_1321 9689 K01687 ilvD dihydroxy-acid dehydratase no 0.69