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Cofit
Protein
Homologs
Top cofit genes for mRNA_4502 from
Rhodosporidium toruloides IFO0880
12870
:
KOG3720 Lysosomal & prostatic acid phosphatases
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8375
16743
HMMPfam-Velvet factor-PF11754
no
0.72
2
mRNA
_7320
15688
BLAST genomic scaffold, msy-sf-7 protein, putative [Rhizoct...
no
0.68
3
mRNA
_7462
15830
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047
no
0.63
4
mRNA
_3399
11767
KOG0733 Nuclear AAA ATPase (VCP subfamily)
no
0.63
5
mRNA
_92
8460
KOG2914 Predicted haloacid-halidohydrolase and related hydrolases
no
0.62
6
mRNA
_2195
10563
HMMPfam-Subtilase family-PF00082,HMMPfam-PA domain-PF02225,HMMPfam-Fn3-like domain (DUF1034)-PF06280,PRINTS-Subtilisin serine protease family (S8) signature-PR00723,ProSitePatterns-Serine proteases, subtilase family, aspartic acid active site.-PS00136,ProSitePatterns-Serine proteases, subtilase family, histidine active site.-PS00137,SUPERFAMILY--SSF52025,SUPERFAMILY--SSF52743
no
0.62
7
mRNA
_5608
13976
K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1
no
0.61
8
mRNA
_631
8999
Hypothetical Protein
no
0.61
9
mRNA
_4859
13227
Hypothetical Protein
no
0.61
10
mRNA
_4450
12818
Hypothetical Protein
no
0.61
11
mRNA
_3325
11693
Hypothetical Protein
no
0.60
12
mRNA
_2742
11110
K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
no
0.60
13
mRNA
_2415
10783
Hypothetical Protein
no
0.59
14
mRNA
_2891
11259
Hypothetical Protein
no
0.59
15
mRNA
_3382
11750
HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217
no
0.58
16
mRNA
_6348
14716
K11373 ELP1, IKI3, IKBKAP elongator complex protein 1
no
0.58
17
mRNA
_4522
12890
KOG0967 ATP-dependent DNA ligase I
no
0.58
18
mRNA
_5722
14090
SUPERFAMILY--SSF52047
no
0.58
19
mRNA
_3701
12069
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
no
0.57
20
mRNA
_4453
12821
KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis
no
0.57