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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_4577 from
Rhodosporidium toruloides IFO0880
12945
:
HMMPfam-CFEM domain-PF05730,SMART--SM00747
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1109
9477
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
no
0.75
2
mRNA
_4805
13173
ProSiteProfiles-BTB domain profile.-PS50097
no
0.72
3
mRNA
_5959
14327
HMMPfam-Domain of unknown function (DUF1793)-PF08760
no
0.68
4
mRNA
_5065
13433
HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253
no
0.67
5
mRNA
_1127
9495
K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase
no
0.65
6
mRNA
_1757
10125
KOG1426 FOG RCC1 domain
no
0.64
7
mRNA
_7434
15802
HMMPfam-Outer membrane protein TOM13-PF08219
no
0.63
8
mRNA
_6905
15273
K14300 NUP133 nuclear pore complex protein Nup133
no
0.62
9
mRNA
_8348
16716
K05349 bglX beta-glucosidase
no
0.62
10
mRNA
_6145
14513
HMMPfam-Protein of unknown function (DUF2456)-PF10445
no
0.61
11
mRNA
_5018
13386
Hypothetical Protein
no
0.60
12
mRNA
_7702
16070
BLAST endoglucanase [Aspergillus fumigatus Af293]
no
0.59
13
mRNA
_4251
12619
K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase
no
0.59
14
mRNA
_1241
9609
K12893 SFRS4_5_6 splicing factor, arginine/serine-rich 4/5/6
no
0.59
15
mRNA
_2646
11014
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058
no
0.58
16
mRNA
_4721
13089
K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4
no
0.58
17
mRNA
_223
8591
HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821
no
0.58
18
mRNA
_2279
10647
K16369 CHO2 phosphatidylethanolamine N-methyltransferase
no
0.57
19
mRNA
_7218
15586
K20405 NPRL2 nitrogen permease regulator 2-like protein
no
0.57
20
mRNA
_1822
10190
KOG0627 Heat shock transcription factor
no
0.56