Top cofit genes for mRNA_4608 from Rhodosporidium toruloides IFO0880

12976: KOG0254 Predicted transporter (major facilitator superfamily)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_6311	14679	K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7	no	0.79
2	mRNA_6177	14545	K00868 pdxK, pdxY pyridoxine kinase	no	0.78
3	mRNA_5944	14312	Hypothetical Protein	no	0.78
4	mRNA_4166	12534	K12597 AIR1_2 protein AIR1/2	no	0.77
5	mRNA_8127	16495	BLAST CigA protein-like protein [Phycomyces blakesleean...	no	0.77
6	mRNA_2650	11018	BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa]	no	0.74
7	mRNA_3660	12028	HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540	no	0.74
8	mRNA_4889	13257	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.73
9	mRNA_5746	14114	Hypothetical Protein	no	0.73
10	mRNA_4567	12935	K10743 RNASEH2A ribonuclease H2 subunit A	no	0.72
11	mRNA_2778	11146	K15264 NSUN5, WBSCR20 putative methyltransferase	no	0.72
12	mRNA_4877	13245	KOG2533 Permease of the major facilitator superfamily	no	0.71
13	mRNA_6376	14744	K14811 DBP3 ATP-dependent RNA helicase DBP3	no	0.71
14	mRNA_5462	13830	HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321	no	0.71
15	mRNA_3619	11987	HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976	no	0.71
16	mRNA_7020	15388	K11446 KDM5, JARID1 histone demethylase JARID1	no	0.70
17	mRNA_3361	11729	K11247 SH3GL endophilin-A	no	0.70
18	mRNA_4041	12409	HMMPfam-Sds3-like-PF08598	no	0.70
19	mRNA_1379	9747	HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236	no	0.70
20	mRNA_2192	10560	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.70