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Cofit
Protein
Homologs
Top cofit genes for mRNA_4701 from
Rhodosporidium toruloides IFO0880
13069
:
HMMPfam-Asp/Glu/Hydantoin racemase-PF01177
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7241
15609
K01265 map methionyl aminopeptidase
no
0.75
2
mRNA
_2648
11016
SUPERFAMILY--SSF52058
no
0.70
3
mRNA
_1251
9619
HMMPfam-Protein of unknown function (DUF2611)-PF11022
no
0.69
4
mRNA
_706
9074
BLAST Myelin gene regulatory factor [Chaetura pelagica]
no
0.67
5
mRNA
_1642
10010
K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4
no
0.66
6
mRNA
_609
8977
K19001 HELLS, DDM1 ATP-dependent DNA helicase
no
0.66
7
mRNA
_1676
10044
SUPERFAMILY--SSF81383
no
0.65
8
mRNA
_3001
11369
ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.65
9
mRNA
_5031
13399
HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
no
0.65
10
mRNA
_2710
11078
BLAST putative protein (N-terminal fragment) [Melanopsichiu...
no
0.65
11
mRNA
_540
8908
KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases)
no
0.63
12
mRNA
_6256
14624
Hypothetical Protein
no
0.63
13
mRNA
_6199
14567
HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112
no
0.63
14
mRNA
_3828
12196
Hypothetical Protein
no
0.62
15
mRNA
_5193
13561
KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily)
no
0.62
16
mRNA
_1154
9522
Hypothetical Protein
no
0.62
17
mRNA
_3833
12201
K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit
no
0.62
18
mRNA
_144
8512
K00698 CHS1 chitin synthase
no
0.61
19
mRNA
_4175
12543
K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6
no
0.61
20
mRNA
_299
8667
ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199
no
0.60