Top cofit genes for mRNA_4721 from Rhodosporidium toruloides IFO0880

13089: K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6923 15291 Hypothetical Protein no 0.83
2 mRNA_4908 13276 K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type no 0.78
3 mRNA_1300 9668 BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy... no 0.78
4 mRNA_5476 13844 KOG4719 Nuclear pore complex protein no 0.76
5 mRNA_8296 16664 K19951 TBC1D8_9 TBC1 domain family member 8/9 no 0.75
6 mRNA_4474 12842 K01426 E3.5.1.4, amiE amidase no 0.73
7 mRNA_4727 13095 Hypothetical Protein no 0.72
8 mRNA_2381 10749 KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins no 0.71
9 mRNA_5807 14175 HMMPfam-Protein of unknown function (DUF2638)-PF10937 no 0.71
10 mRNA_170 8538 K12179 COPS6, CSN6 COP9 signalosome complex subunit 6 no 0.71
11 mRNA_1574 9942 K06867 K06867 uncharacterized protein no 0.69
12 mRNA_731 9099 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.69
13 mRNA_3920 12288 K12767 RIM15 serine/threonine-protein kinase RIM15 no 0.69
14 mRNA_8154 16522 HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179 no 0.69
15 mRNA_2175 10543 HMMPfam-Mus7/MMS22 family-PF09462 no 0.69
16 mRNA_6761 15129 K00944 AK3 nucleoside-triphosphate--adenylate kinase no 0.69
17 mRNA_1109 9477 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 no 0.68
18 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.68
19 mRNA_128 8496 K11592 DICER1, DCR1 endoribonuclease Dicer no 0.68
20 mRNA_6905 15273 K14300 NUP133 nuclear pore complex protein Nup133 no 0.67