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Cofit
Protein
Homologs
Top cofit genes for mRNA_4788 from
Rhodosporidium toruloides IFO0880
13156
:
KOG0143 Iron/ascorbate family oxidoreductases
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5117
13485
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.77
2
mRNA
_2830
11198
BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag...
no
0.77
3
mRNA
_5706
14074
Hypothetical Protein
no
0.76
4
mRNA
_7168
15536
HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978
no
0.71
5
mRNA
_3310
11678
HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906
no
0.69
6
mRNA
_3511
11879
K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein
no
0.68
7
mRNA
_8458
16826
Hypothetical Protein
no
0.67
8
mRNA
_3025
11393
K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1
no
0.67
9
mRNA
_5730
14098
SUPERFAMILY--SSF47113
no
0.65
10
mRNA
_2836
11204
HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221
no
0.65
11
mRNA
_2218
10586
SUPERFAMILY--SSF52047
no
0.64
12
mRNA
_3256
11624
K01681 ACO, acnA aconitate hydratase
no
0.64
13
mRNA
_6395
14763
K19403 MCPH1 microcephalin
no
0.64
14
mRNA
_290
8658
HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473
no
0.63
15
mRNA
_7180
15548
Hypothetical Protein
no
0.63
16
mRNA
_1760
10128
KOG0940 Ubiquitin protein ligase RSP5/NEDD4
no
0.62
17
mRNA
_2207
10575
K08284 MID1 calcium channel MID1
no
0.62
18
mRNA
_3092
11460
KOG4784 Uncharacterized conserved protein
no
0.61
19
mRNA
_3255
11623
K01711 gmd, GMDS GDPmannose 4,6-dehydratase
no
0.61
20
mRNA
_1139
9507
KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily
no
0.61