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Cofit
Protein
Homologs
Top cofit genes for mRNA_4872 from
Rhodosporidium toruloides IFO0880
13240
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_959
9327
Hypothetical Protein
no
0.78
2
mRNA
_5462
13830
HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321
no
0.77
3
mRNA
_3649
12017
HMMPfam-Protein of unknown function, DUF604-PF04646
no
0.77
4
mRNA
_8294
16662
Hypothetical Protein
no
0.76
5
mRNA
_5019
13387
HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
no
0.75
6
mRNA
_5212
13580
K00624 E2.3.1.7 carnitine O-acetyltransferase
no
0.75
7
mRNA
_6246
14614
Hypothetical Protein
no
0.74
8
mRNA
_3470
11838
KOG1492 C3H1-type Zn-finger protein
no
0.74
9
mRNA
_1873
10241
BLAST Rab geranylgeranyltransferase [Mycena chlorophos]
no
0.74
10
mRNA
_7806
16174
Hypothetical Protein
no
0.73
11
mRNA
_4585
12953
SUPERFAMILY--SSF103473
no
0.73
12
mRNA
_1126
9494
K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase
no
0.73
13
mRNA
_6311
14679
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
no
0.73
14
mRNA
_2034
10402
HMMPfam-Spherulation-specific family 4-PF12138
no
0.72
15
mRNA
_4121
12489
KOG3195 Uncharacterized membrane protein NPD008/CGI-148
no
0.72
16
mRNA
_7134
15502
Hypothetical Protein
no
0.72
17
mRNA
_7422
15790
Hypothetical Protein
no
0.72
18
mRNA
_5774
14142
K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126
no
0.71
19
mRNA
_7804
16172
KOG1204 Predicted dehydrogenase
no
0.71
20
mRNA
_581
8949
Interpro ERCC4 domain 0
no
0.71