Top cofit genes for mRNA_4926 from Rhodosporidium toruloides IFO0880

13294: ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1662 10030 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.80
2 mRNA_3228 11596 Hypothetical Protein no 0.75
3 mRNA_3069 11437 KOG2505 Ankyrin repeat protein no 0.72
4 mRNA_1926 10294 HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266 no 0.70
5 mRNA_2823 11191 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047 no 0.70
6 mRNA_8344 16712 K20308 TRAPPC11 trafficking protein particle complex subunit 11 no 0.70
7 mRNA_2694 11062 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695 no 0.70
8 mRNA_5755 14123 HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277 no 0.69
9 mRNA_3278 11646 K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase no 0.69
10 mRNA_7170 15538 Hypothetical Protein no 0.68
11 mRNA_4120 12488 Hypothetical Protein no 0.68
12 mRNA_3096 11464 K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B no 0.68
13 mRNA_2419 10787 HMMPfam-Domain of unknown function (DUF4385)-PF14328 no 0.68
14 mRNA_8250 16618 K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase no 0.68
15 mRNA_3178 11546 KOG4561 Uncharacterized conserved protein, contains TBC domain no 0.68
16 mRNA_5198 13566 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases no 0.65
17 mRNA_2000 10368 K09650 PARL, PSARL, PCP1 rhomboid-like protein no 0.65
18 mRNA_5172 13540 BLAST similar to An11g07040 [Aspergillus kawachii IFO 4308] no 0.65
19 mRNA_8458 16826 Hypothetical Protein no 0.65
20 mRNA_4945 13313 Hypothetical Protein no 0.64