Top cofit genes for mRNA_4940 from Rhodosporidium toruloides IFO0880

13308: K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4566	12934	KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins	no	0.77
2	mRNA_3252	11620	KOG3348 BolA (bacterial stress-induced morphogen)-related protein	no	0.76
3	mRNA_6514	14882	KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter	no	0.69
4	mRNA_3305	11673	KOG3299 Uncharacterized conserved protein	no	0.68
5	mRNA_8346	16714	Hypothetical Protein	no	0.68
6	mRNA_5616	13984	HMMPfam-GRF zinc finger-PF06839	no	0.68
7	mRNA_176	8544	HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474	no	0.68
8	mRNA_8357	16725	K01739 metB cystathionine gamma-synthase	no	0.67
9	mRNA_6775	15143	K14784 CMS1 protein CMS1	no	0.65
10	mRNA_3140	11508	BLAST peptide release factor [Melanopsichium pennsylvanicum 4]	no	0.65
11	mRNA_7244	15612	HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679	no	0.65
12	mRNA_6346	14714	HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335	no	0.65
13	mRNA_64	8432	HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236	no	0.64
14	mRNA_5789	14157	KOG2859 DNA repair protein, member of the recA/RAD51 family	no	0.64
15	mRNA_7444	15812	Hypothetical Protein	no	0.64
16	mRNA_8267	16635	K01897 ACSL, fadD long-chain acyl-CoA synthetase	no	0.64
17	mRNA_5042	13410	K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2	no	0.64
18	mRNA_6239	14607	K01372 BLMH, pepC bleomycin hydrolase	no	0.63
19	mRNA_5460	13828	Hypothetical Protein	no	0.63
20	mRNA_5836	14204	Hypothetical Protein	no	0.62