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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_5041 from
Rhodosporidium toruloides IFO0880
13409
:
K01077 E3.1.3.1, phoA, phoB alkaline phosphatase
SEED: Alkaline phosphatase (EC 3.1.3.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7946
16314
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.75
2
mRNA
_4699
13067
K09140 TSR3 pre-rRNA-processing protein TSR3
no
0.72
3
mRNA
_2063
10431
SUPERFAMILY--SSF140860
no
0.69
4
mRNA
_4017
12385
K13333 PLB lysophospholipase
no
0.69
5
mRNA
_7428
15796
Interpro XLF-Cernunnos, XRcc4-like factor, NHEJ component
no
0.67
6
mRNA
_3276
11644
BLAST Nuclease PA3 [Grifola frondosa]
no
0.67
7
mRNA
_6323
14691
Hypothetical Protein
no
0.67
8
mRNA
_4741
13109
KOG2208 Vigilin
no
0.66
9
mRNA
_4648
13016
HMMPfam-Mediator complex subunit Med5-PF08689
no
0.66
10
mRNA
_4318
12686
HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427
no
0.65
11
mRNA
_4618
12986
Hypothetical Protein
no
0.65
12
mRNA
_3700
12068
K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2
no
0.65
13
mRNA
_7785
16153
HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452
no
0.65
14
mRNA
_2180
10548
KOG0166 Karyopherin (importin) alpha
no
0.65
15
mRNA
_2134
10502
K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5
no
0.65
16
mRNA
_4992
13360
Hypothetical Protein
no
0.64
17
mRNA
_4162
12530
Hypothetical Protein
no
0.64
18
mRNA
_2161
10529
K03458 TC.NCS2 nucleobase-cation symporter-2, NCS2 family
no
0.64
19
mRNA
_7386
15754
HMMPfam-F-box-like-PF12937
no
0.63
20
mRNA
_6726
15094
Hypothetical Protein
no
0.63