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Cofit
Protein
Homologs
Top cofit genes for mRNA_5092 from
Rhodosporidium toruloides IFO0880
13460
:
HMMPfam-RTA1 like protein-PF04479
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8389
16757
Hypothetical Protein
no
0.81
2
mRNA
_1594
9962
K16261 YAT yeast amino acid transporter
no
0.76
3
mRNA
_5517
13885
PRINTS-Proline rich extensin signature-PR01217
no
0.73
4
mRNA
_1160
9528
KOG4159 Predicted E3 ubiquitin ligase
no
0.72
5
mRNA
_2897
11265
K12613 DCP2 mRNA-decapping enzyme subunit 2
no
0.72
6
mRNA
_1238
9606
SUPERFAMILY--SSF52047
no
0.71
7
mRNA
_6615
14983
Hypothetical Protein
no
0.71
8
mRNA
_718
9086
KOG2776 Metallopeptidase
no
0.70
9
mRNA
_4736
13104
K02503 HINT1, hinT, hit histidine triad (HIT) family protein
no
0.69
10
mRNA
_7829
16197
K06126 COQ6 ubiquinone biosynthesis monooxygenase Coq6
no
0.69
11
mRNA
_1600
9968
K12178 COPS4, CSN4 COP9 signalosome complex subunit 4
no
0.69
12
mRNA
_5354
13722
KOG0557 Dihydrolipoamide acetyltransferase
no
0.69
13
mRNA
_3760
12128
K10746 EXO1 exonuclease 1
no
0.69
14
mRNA
_4753
13121
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.68
15
mRNA
_3270
11638
Hypothetical Protein
no
0.68
16
mRNA
_1353
9721
HMMPfam-Starch binding domain-PF00686,ProSiteProfiles-CBM20 (carbohydrate binding type-20) domain profile.-PS51166,SMART-Starch binding domain-SM01065,SUPERFAMILY--SSF49452
no
0.68
17
mRNA
_3540
11908
K00784 rnz ribonuclease Z
no
0.67
18
mRNA
_324
8692
K00135 gabD succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase
no
0.67
19
mRNA
_4972
13340
KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily
no
0.67
20
mRNA
_4032
12400
Hypothetical Protein
no
0.67