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Cofit
Protein
Homologs
Top cofit genes for mRNA_5258 from
Rhodosporidium toruloides IFO0880
13626
:
KOG0538 Glycolate oxidase
SEED: L-lactate dehydrogenase (EC 1.1.2.3)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1411
9779
Hypothetical Protein
no
0.85
2
mRNA
_6311
14679
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
no
0.85
3
mRNA
_4889
13257
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.81
4
mRNA
_2778
11146
K15264 NSUN5, WBSCR20 putative methyltransferase
no
0.79
5
mRNA
_4585
12953
SUPERFAMILY--SSF103473
no
0.79
6
mRNA
_6177
14545
K00868 pdxK, pdxY pyridoxine kinase
no
0.78
7
mRNA
_4961
13329
Hypothetical Protein
no
0.77
8
mRNA
_2
8370
PRINTS-Proline rich extensin signature-PR01217
no
0.77
9
mRNA
_2132
10500
Hypothetical Protein
no
0.77
10
mRNA
_5233
13601
HMMPfam-Transmembrane amino acid transporter protein-PF01490
no
0.76
11
mRNA
_3423
11791
KOG3655 Drebrins and related actin binding proteins
no
0.76
12
mRNA
_1822
10190
KOG0627 Heat shock transcription factor
no
0.76
13
mRNA
_2714
11082
KOG2477 Uncharacterized conserved protein
no
0.76
14
mRNA
_3841
12209
K13431 SRPR signal recognition particle receptor subunit alpha
no
0.75
15
mRNA
_4041
12409
HMMPfam-Sds3-like-PF08598
no
0.75
16
mRNA
_3087
11455
HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489
no
0.75
17
mRNA
_8076
16444
Hypothetical Protein
no
0.74
18
mRNA
_8308
16676
ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
no
0.74
19
mRNA
_2942
11310
HMMPfam-VanZ like family-PF04892
no
0.73
20
mRNA
_5623
13991
KOG3393 Predicted membrane protein
no
0.73