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Cofit
Protein
Homologs
Top cofit genes for mRNA_5335 from
Rhodosporidium toruloides IFO0880
13703
:
HMMPfam-Domain of unknown function (DUF4202)-PF13875
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2287
10655
KOG3870 Uncharacterized conserved protein
no
0.83
2
mRNA
_7761
16129
KOG1176 Acyl-CoA synthetase
no
0.83
3
mRNA
_5454
13822
KOG2673 Uncharacterized conserved protein, contains PSP domain
no
0.78
4
mRNA
_631
8999
Hypothetical Protein
no
0.75
5
mRNA
_480
8848
ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689
no
0.74
6
mRNA
_3203
11571
Hypothetical Protein
no
0.74
7
mRNA
_6810
15178
HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729
no
0.73
8
mRNA
_3612
11980
Hypothetical Protein
no
0.72
9
mRNA
_2185
10553
HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879
no
0.72
10
mRNA
_387
8755
Hypothetical Protein
no
0.72
11
mRNA
_6058
14426
SUPERFAMILY--SSF52047
no
0.71
12
mRNA
_2368
10736
Hypothetical Protein
no
0.71
13
mRNA
_3993
12361
KOG0627 Heat shock transcription factor
no
0.70
14
mRNA
_942
9310
KOG1743 Ferric reductase-like proteins
no
0.70
15
mRNA
_2742
11110
K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
no
0.70
16
mRNA
_3589
11957
HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF101908,SUPERFAMILY--SSF81383
no
0.70
17
mRNA
_7942
16310
K12824 TCERG1, CA150 transcription elongation regulator 1
no
0.70
18
mRNA
_5703
14071
KOG1289 Amino acid transporters
no
0.70
19
mRNA
_5625
13993
KOG1611 Predicted short chain-type dehydrogenase
no
0.69
20
mRNA
_8335
16703
HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895
no
0.69