Top cofit genes for mRNA_5401 from Rhodosporidium toruloides IFO0880

13769: HMMPfam-Complex 1 protein (LYR family)-PF05347

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_213 8581 KOG1362 Choline transporter-like protein no 0.71
2 mRNA_4426 12794 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 no 0.70
3 mRNA_4936 13304 HMMPfam-MFS_1 like family-PF12832 no 0.70
4 mRNA_400 8768 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase no 0.67
5 mRNA_6315 14683 K10609 CUL4 cullin 4 no 0.67
6 mRNA_7484 15852 K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D) no 0.65
7 mRNA_2984 11352 HMMPfam-Cytochrome c oxidase subunit VIIc-PF02935,SUPERFAMILY--SSF81427 no 0.65
8 mRNA_2868 11236 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 no 0.65
9 mRNA_7249 15617 Hypothetical Protein no 0.65
10 mRNA_5160 13528 Hypothetical Protein no 0.64
11 mRNA_102 8470 HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679 no 0.63
12 mRNA_7034 15402 HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934 no 0.63
13 mRNA_7427 15795 SUPERFAMILY--SSF51197 no 0.63
14 mRNA_3427 11795 HMMPfam-Domain of unknown function (DUF1996)-PF09362 no 0.63
15 mRNA_7785 16153 HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452 no 0.62
16 mRNA_6964 15332 K18754 LIN28 protein lin-28 no 0.62
17 mRNA_689 9057 HMMPfam-Eisosome component PIL1-PF13805 no 0.61
18 mRNA_2365 10733 HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 no 0.61
19 mRNA_2648 11016 SUPERFAMILY--SSF52058 no 0.61
20 mRNA_7271 15639 HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088 no 0.61