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Cofit
Protein
Homologs
Top cofit genes for mRNA_5640 from
Rhodosporidium toruloides IFO0880
14008
:
BLAST putative acyl- dehydrogenase [Moniliophthora rore...
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8077
16445
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.88
2
mRNA
_2804
11172
K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2
no
0.86
3
mRNA
_4282
12650
Hypothetical Protein
no
0.84
4
mRNA
_5169
13537
Hypothetical Protein
no
0.82
5
mRNA
_1245
9613
HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481
no
0.81
6
mRNA
_460
8828
K15177 LEO1 RNA polymerase-associated protein LEO1
no
0.80
7
mRNA
_7147
15515
Hypothetical Protein
no
0.80
8
mRNA
_5294
13662
K02830 HRAD1, RAD17 cell cycle checkpoint protein
no
0.79
9
mRNA
_1300
9668
BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...
no
0.79
10
mRNA
_5456
13824
K07034 K07034 uncharacterized protein
no
0.79
11
mRNA
_6293
14661
K18467 VPS29 vacuolar protein sorting-associated protein 29
no
0.79
12
mRNA
_4387
12755
HMMPfam-Ctf8-PF09696
no
0.78
13
mRNA
_7204
15572
HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383
no
0.78
14
mRNA
_3838
12206
HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961
no
0.77
15
mRNA
_6259
14627
HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713
no
0.77
16
mRNA
_1739
10107
Hypothetical Protein
no
0.77
17
mRNA
_8365
16733
Hypothetical Protein
no
0.77
18
mRNA
_2175
10543
HMMPfam-Mus7/MMS22 family-PF09462
no
0.77
19
mRNA
_2343
10711
HMMPfam-GPR1/FUN34/yaaH family-PF01184
no
0.76
20
mRNA
_3785
12153
K15178 RTF1 RNA polymerase-associated protein RTF1
no
0.76