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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_5806 from
Rhodosporidium toruloides IFO0880
14174
:
KOG4197 FOG PPR repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4964
13332
K08334 BECN1, VPS30, ATG6 beclin 1
no
0.81
2
mRNA
_3815
12183
K06631 PLK1 polo-like kinase 1
no
0.80
3
mRNA
_4054
12422
KOG2973 Uncharacterized conserved protein
no
0.80
4
mRNA
_2635
11003
KOG2615 Permease of the major facilitator superfamily
no
0.79
5
mRNA
_4001
12369
Hypothetical Protein
no
0.79
6
mRNA
_7597
15965
Hypothetical Protein
no
0.77
7
mRNA
_1547
9915
K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2
no
0.77
8
mRNA
_8453
16821
Hypothetical Protein
no
0.76
9
mRNA
_7310
15678
BLAST cytochrome P450 3A4 [Neurospora crassa OR74A]
no
0.75
10
mRNA
_523
8891
K11644 SIN3A paired amphipathic helix protein Sin3a
no
0.75
11
mRNA
_6347
14715
Hypothetical Protein
no
0.75
12
mRNA
_5082
13450
K10696 BRE1 E3 ubiquitin-protein ligase BRE1
no
0.75
13
mRNA
_6185
14553
SUPERFAMILY--SSF69118
no
0.74
14
mRNA
_4745
13113
K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4
no
0.74
15
mRNA
_4359
12727
Hypothetical Protein
no
0.73
16
mRNA
_5593
13961
K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase
no
0.73
17
mRNA
_5863
14231
K09281 K09281 copper-fist transcription factor
no
0.72
18
mRNA
_4367
12735
K08856 STK16 serine/threonine kinase 16
no
0.72
19
mRNA
_7085
15453
HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689
no
0.72
20
mRNA
_4621
12989
KOG0141 Isovaleryl-CoA dehydrogenase
no
0.72