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Cofit
Protein
Homologs
Top cofit genes for mRNA_5835 from
Rhodosporidium toruloides IFO0880
14203
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6530
14898
K03809 wrbA NAD(P)H dehydrogenase (quinone)
no
0.87
2
mRNA
_1144
9512
K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial
no
0.86
3
mRNA
_5327
13695
Hypothetical Protein
no
0.84
4
mRNA
_729
9097
BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi...
no
0.82
5
mRNA
_300
8668
BLAST transcription factor hoxa13 [Aspergillus bombycis]
no
0.82
6
mRNA
_3312
11680
Hypothetical Protein
no
0.82
7
mRNA
_4770
13138
KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference
no
0.82
8
mRNA
_4629
12997
K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14
no
0.81
9
mRNA
_3003
11371
ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
no
0.81
10
mRNA
_4194
12562
K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase
no
0.81
11
mRNA
_8339
16707
K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase
no
0.81
12
mRNA
_6485
14853
K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase
no
0.80
13
mRNA
_4630
12998
Hypothetical Protein
no
0.80
14
mRNA
_597
8965
ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616
no
0.80
15
mRNA
_7073
15441
HMMPfam-Domain of unknown function DUF77-PF01910,SUPERFAMILY--SSF89957,TIGRFAM-TIGR00106 uncharacterized protein, MTH1187 family-TIGR00106
no
0.80
16
mRNA
_6484
14852
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.80
17
mRNA
_5047
13415
HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112
no
0.80
18
mRNA
_4866
13234
KOG2881 Predicted membrane protein
no
0.79
19
mRNA
_691
9059
BLAST gliotoxin biosynthesis protein GliK [Marssonina b...
no
0.79
20
mRNA
_7883
16251
Hypothetical Protein
no
0.79