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Cofit
Protein
Homologs
Top cofit genes for mRNA_5843 from
Rhodosporidium toruloides IFO0880
14211
:
HMMPfam-Tim10/DDP family zinc finger-PF02953
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5756
14124
HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689
no
0.87
2
mRNA
_7912
16280
K11434 PRMT1 type I protein arginine methyltransferase
no
0.77
3
mRNA
_6100
14468
Hypothetical Protein
no
0.77
4
mRNA
_2960
11328
KOG2617 Citrate synthase
no
0.75
5
mRNA
_43
8411
K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3
no
0.74
6
mRNA
_7187
15555
K00799 GST, gst glutathione S-transferase
no
0.74
7
mRNA
_786
9154
Hypothetical Protein
no
0.74
8
mRNA
_2665
11033
HMMPfam-Protein of unknown function (DUF3431)-PF11913
no
0.73
9
mRNA
_5579
13947
HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735
no
0.73
10
mRNA
_2079
10447
Hypothetical Protein
no
0.73
11
mRNA
_68
8436
K12599 SKI2, SKIV2L antiviral helicase SKI2
no
0.73
12
mRNA
_5921
14289
K14789 NOP6 nucleolar protein 6
no
0.72
13
mRNA
_201
8569
K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase
no
0.72
14
mRNA
_3632
12000
HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112
no
0.71
15
mRNA
_3900
12268
SUPERFAMILY--SSF55729
no
0.71
16
mRNA
_3136
11504
KOG2615 Permease of the major facilitator superfamily
no
0.71
17
mRNA
_5650
14018
Hypothetical Protein
no
0.71
18
mRNA
_4498
12866
Hypothetical Protein
no
0.71
19
mRNA
_5950
14318
KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain
no
0.70
20
mRNA
_6813
15181
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.70