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Cofit
Protein
Homologs
Top cofit genes for mRNA_5846 from
Rhodosporidium toruloides IFO0880
14214
:
K04508 TBL1 transducin (beta)-like 1
SEED: High-affnity carbon uptake protein Hat/HatR
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4190
12558
Hypothetical Protein
no
0.85
2
mRNA
_3504
11872
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.84
3
mRNA
_1044
9412
K07765 MBTPS2 S2P endopeptidase
no
0.83
4
mRNA
_3917
12285
KOG4479 Transcription factor e(y)2
no
0.81
5
mRNA
_7679
16047
K12861 BCAS2 pre-mRNA-splicing factor SPF27
no
0.79
6
mRNA
_440
8808
HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321
no
0.79
7
mRNA
_437
8805
Hypothetical Protein
no
0.77
8
mRNA
_6951
15319
ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065
no
0.76
9
mRNA
_122
8490
HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685
no
0.75
10
mRNA
_3884
12252
Hypothetical Protein
no
0.75
11
mRNA
_4605
12973
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.75
12
mRNA
_5322
13690
K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase
no
0.75
13
mRNA
_4625
12993
K09660 MPDU1 mannose-P-dolichol utilization defect 1
no
0.74
14
mRNA
_2914
11282
Hypothetical Protein
no
0.74
15
mRNA
_5042
13410
K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2
no
0.74
16
mRNA
_5616
13984
HMMPfam-GRF zinc finger-PF06839
no
0.74
17
mRNA
_8246
16614
Hypothetical Protein
no
0.74
18
mRNA
_1969
10337
K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1
no
0.74
19
mRNA
_5091
13459
Hypothetical Protein
no
0.74
20
mRNA
_2798
11166
K03537 POP5 ribonuclease P/MRP protein subunit POP5
no
0.74