Top cofit genes for mRNA_6048 from Rhodosporidium toruloides IFO0880

14416: Interpro WSTF, HB1, Itc1p, MBD9 motif 1

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4040	12408	K06997 yggS, PROSC PLP dependent protein	no	0.80
2	mRNA_305	8673	HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648	no	0.75
3	mRNA_2365	10733	HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562	no	0.74
4	mRNA_815	9183	K04555 UBE2G2, UBC7 ubiquitin-conjugating enzyme E2 G2	no	0.73
5	mRNA_2835	11203	K00022 HADH 3-hydroxyacyl-CoA dehydrogenase	no	0.72
6	mRNA_2239	10607	K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6	no	0.72
7	mRNA_5679	14047	KOG1944 Peroxisomal membrane protein MPV17 and related proteins	no	0.72
8	mRNA_6103	14471	K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)	no	0.71
9	mRNA_1468	9836	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701	no	0.71
10	mRNA_3079	11447	HMMPfam-DNA polymerase Ligase (LigD)-PF13298	no	0.71
11	mRNA_6441	14809	K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit	no	0.70
12	mRNA_8410	16778	K12761 SNF1 carbon catabolite-derepressing protein kinase	no	0.70
13	mRNA_4374	12742	K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase	no	0.69
14	mRNA_4627	12995	K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4	no	0.69
15	mRNA_5906	14274	KOG2568 Predicted membrane protein	no	0.69
16	mRNA_6199	14567	HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112	no	0.69
17	mRNA_2868	11236	HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266	no	0.69
18	mRNA_3463	11831	Hypothetical Protein	no	0.68
19	mRNA_4879	13247	KOG1259 Nischarin, modulator of integrin alpha5 subunit action	no	0.68
20	mRNA_7551	15919	KOG1032 Uncharacterized conserved protein, contains GRAM domain	no	0.68