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Cofit
Protein
Homologs
Top cofit genes for mRNA_6150 from
Rhodosporidium toruloides IFO0880
14518
:
KOG3399 Predicted Yippee-type zinc-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_3553
11921
Hypothetical Protein
no
0.68
2
mRNA
_2947
11315
Hypothetical Protein
no
0.68
3
mRNA
_2503
10871
SUPERFAMILY--SSF63829
no
0.67
4
mRNA
_4334
12702
K10534 NR nitrate reductase (NAD(P)H)
no
0.66
5
mRNA
_4678
13046
K11252 H2B histone H2B
no
0.64
6
mRNA
_5956
14324
KOG2238 Uncharacterized conserved protein TEX2, contains PH domain
no
0.64
7
mRNA
_1143
9511
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.64
8
mRNA
_1554
9922
KOG1611 Predicted short chain-type dehydrogenase
no
0.63
9
mRNA
_5957
14325
HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344
no
0.62
10
mRNA
_2628
10996
K09468 MSN2_4 zinc finger protein MSN2/4
no
0.62
11
mRNA
_2951
11319
Hypothetical Protein
no
0.61
12
mRNA
_4118
12486
Hypothetical Protein
no
0.61
13
mRNA
_2065
10433
Hypothetical Protein
no
0.61
14
mRNA
_5936
14304
HMMPfam-Homeobox domain-PF00046,HMMPfam-Predicted membrane protein (DUF2231)-PF09990,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689
no
0.60
15
mRNA
_3895
12263
Hypothetical Protein
no
0.60
16
mRNA
_5851
14219
SUPERFAMILY--SSF51735
no
0.59
17
mRNA
_3430
11798
Hypothetical Protein
no
0.59
18
mRNA
_697
9065
KOG1389 3-oxoacyl CoA thiolase
no
0.58
19
mRNA
_5961
14329
HMMPfam-F-box-like-PF12937
no
0.58
20
mRNA
_6084
14452
SUPERFAMILY--SSF54427
no
0.58