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Cofit
Protein
Homologs
Top cofit genes for mRNA_6152 from
Rhodosporidium toruloides IFO0880
14520
:
HMMPfam-Slx4 endonuclease-PF09494
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8116
16484
K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase
no
0.82
2
mRNA
_8131
16499
KOG2431 1, 2-alpha-mannosidase
no
0.77
3
mRNA
_1319
9687
KOG0404 Thioredoxin reductase
no
0.76
4
mRNA
_1022
9390
KOG1550 Extracellular protein SEL-1 and related proteins
no
0.75
5
mRNA
_3343
11711
HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474
no
0.74
6
mRNA
_3033
11401
BLAST related to transcription factor medusa [Melanopsichiu...
no
0.74
7
mRNA
_4320
12688
K03255 TIF31, CLU1 protein TIF31
no
0.74
8
mRNA
_3114
11482
BLAST c6 zinc finger domain containing protein [Diplodia co...
no
0.74
9
mRNA
_8020
16388
K19841 STE50 protein STE50
no
0.74
10
mRNA
_4986
13354
K17943 PUM pumilio RNA-binding family
no
0.73
11
mRNA
_860
9228
HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268
no
0.73
12
mRNA
_4983
13351
SUPERFAMILY--SSF48371
no
0.73
13
mRNA
_4744
13112
HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994
no
0.72
14
mRNA
_1421
9789
K06950 K06950 uncharacterized protein
no
0.72
15
mRNA
_3914
12282
HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350
no
0.72
16
mRNA
_997
9365
K08735 MSH2 DNA mismatch repair protein MSH2
no
0.72
17
mRNA
_6782
15150
HMMPfam-Man1-Src1p-C-terminal domain-PF09402,HMMPfam-HeH/LEM domain-PF12949
no
0.71
18
mRNA
_394
8762
KOG0714 Molecular chaperone (DnaJ superfamily)
no
0.71
19
mRNA
_4732
13100
HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338
no
0.70
20
mRNA
_5396
13764
KOG4567 GTPase-activating protein
no
0.70