Top cofit genes for mRNA_6180 from Rhodosporidium toruloides IFO0880

14548: KOG0218 Mismatch repair MSH3
SEED: DNA mismatch repair protein MutS

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_963	9331	K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	no	0.86
2	mRNA_1740	10108	K20828 ZNF143_76, STAF zinc finger protein 143/76	no	0.85
3	mRNA_6649	15017	K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3	no	0.85
4	mRNA_2175	10543	HMMPfam-Mus7/MMS22 family-PF09462	no	0.85
5	mRNA_4727	13095	Hypothetical Protein	no	0.84
6	mRNA_1721	10089	K11483 HOS2 histone deacetylase HOS2	no	0.83
7	mRNA_6356	14724	K01477 alc, ALLC allantoicase	no	0.82
8	mRNA_1596	9964	K14557 UTP6 U3 small nucleolar RNA-associated protein 6	no	0.82
9	mRNA_2990	11358	SUPERFAMILY--SSF52047	no	0.81
10	mRNA_4282	12650	Hypothetical Protein	no	0.81
11	mRNA_3374	11742	KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins	no	0.81
12	mRNA_3946	12314	K06176 truD, PUS7 tRNA pseudouridine13 synthase	no	0.79
13	mRNA_1245	9613	HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481	no	0.79
14	mRNA_2061	10429	HMMPfam-Protein of unknown function (DUF1640)-PF07798	no	0.79
15	mRNA_6923	15291	Hypothetical Protein	no	0.79
16	mRNA_4092	12460	KOG0941 E3 ubiquitin protein ligase	no	0.79
17	mRNA_296	8664	K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3	no	0.79
18	mRNA_8135	16503	K00804 GGPS1 geranylgeranyl diphosphate synthase, type III	no	0.78
19	mRNA_1300	9668	BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...	no	0.78
20	mRNA_1453	9821	HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443	no	0.78