Top cofit genes for mRNA_6257 from Rhodosporidium toruloides IFO0880

14625: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 no 0.87
2 mRNA_4340 12708 K01074 PPT palmitoyl-protein thioesterase no 0.87
3 mRNA_8011 16379 K09537 DNAJC17 DnaJ homolog subfamily C member 17 no 0.85
4 mRNA_1758 10126 KOG2998 Uncharacterized conserved protein no 0.84
5 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.84
6 mRNA_4328 12696 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.82
7 mRNA_3271 11639 K07126 K07126 uncharacterized protein no 0.81
8 mRNA_3374 11742 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins no 0.81
9 mRNA_2889 11257 K08184 SLC16A7 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 7 no 0.81
10 mRNA_1204 9572 K11253 H3 histone H3 no 0.81
11 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.80
12 mRNA_2459 10827 KOG2747 Histone acetyltransferase (MYST family) no 0.80
13 mRNA_7147 15515 Hypothetical Protein no 0.79
14 mRNA_2691 11059 Hypothetical Protein no 0.79
15 mRNA_3900 12268 SUPERFAMILY--SSF55729 no 0.79
16 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.78
17 mRNA_5756 14124 HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.78
18 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.78
19 mRNA_208 8576 K19270 yfbT, yniC sugar-phosphatase no 0.77
20 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.77