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Cofit
Protein
Homologs
Top cofit genes for mRNA_6303 from
Rhodosporidium toruloides IFO0880
14671
:
HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4166
12534
K12597 AIR1_2 protein AIR1/2
no
0.87
2
mRNA
_2202
10570
K00365 uaZ urate oxidase
no
0.78
3
mRNA
_3685
12053
KOG4212 RNA-binding protein hnRNP-M
no
0.78
4
mRNA
_7797
16165
Hypothetical Protein
no
0.75
5
mRNA
_504
8872
Hypothetical Protein
no
0.74
6
mRNA
_7422
15790
Hypothetical Protein
no
0.73
7
mRNA
_6246
14614
Hypothetical Protein
no
0.73
8
mRNA
_3350
11718
KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily
no
0.72
9
mRNA
_756
9124
HMMPfam-Protein of unknown function (DUF3074)-PF11274,SUPERFAMILY--SSF55961
no
0.72
10
mRNA
_4288
12656
Hypothetical Protein
no
0.72
11
mRNA
_4041
12409
HMMPfam-Sds3-like-PF08598
no
0.72
12
mRNA
_8294
16662
Hypothetical Protein
no
0.71
13
mRNA
_5313
13681
KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15
no
0.71
14
mRNA
_6305
14673
HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028
no
0.71
15
mRNA
_3087
11455
HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489
no
0.71
16
mRNA
_7992
16360
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.71
17
mRNA
_4622
12990
K20168 TBC1D15 TBC1 domain family member 15
no
0.71
18
mRNA
_5915
14283
HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474
no
0.70
19
mRNA
_2958
11326
K17907 ATG9 autophagy-related protein 9
no
0.70
20
mRNA
_5019
13387
HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
no
0.70