Top cofit genes for mRNA_6401 from Rhodosporidium toruloides IFO0880

14769: HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_2185	10553	HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879	no	0.77
2	mRNA_890	9258	HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065	no	0.76
3	mRNA_5804	14172	Hypothetical Protein	no	0.76
4	mRNA_456	8824	Hypothetical Protein	no	0.76
5	mRNA_480	8848	ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689	no	0.75
6	mRNA_7604	15972	K09549 PFDN2 prefoldin subunit 2	no	0.75
7	mRNA_6505	14873	Hypothetical Protein	no	0.74
8	mRNA_4778	13146	Hypothetical Protein	no	0.74
9	mRNA_6198	14566	BLAST tyrosine kinase domain protein [Rhizoctonia solani AG...	no	0.73
10	mRNA_4580	12948	Hypothetical Protein	no	0.73
11	mRNA_6823	15191	BLAST TNFR/NGFR cysteine-rich region family protein [Rh...	no	0.72
12	mRNA_5289	13657	K00344 qor, CRYZ NADPH2-quinone reductase	no	0.72
13	mRNA_4664	13032	Hypothetical Protein	no	0.70
14	mRNA_1866	10234	KOG4455 Uncharacterized conserved protein	no	0.69
15	mRNA_387	8755	Hypothetical Protein	no	0.69
16	mRNA_3466	11834	HMMPfam-Sds3-like-PF08598	no	0.69
17	mRNA_8485	16853	K12946 SPCS1 signal peptidase complex subunit 1	no	0.69
18	mRNA_5335	13703	HMMPfam-Domain of unknown function (DUF4202)-PF13875	no	0.69
19	mRNA_1863	10231	HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281	no	0.68
20	mRNA_3325	11693	Hypothetical Protein	no	0.68