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Cofit
Protein
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Top cofit genes for mRNA_6532 from
Rhodosporidium toruloides IFO0880
14900
:
K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4587
12955
HMMPfam-Complex1_LYR-like-PF13232
no
0.86
2
mRNA
_5702
14070
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
no
0.85
3
mRNA
_5031
13399
HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
no
0.84
4
mRNA
_299
8667
ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199
no
0.83
5
mRNA
_739
9107
K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase
no
0.82
6
mRNA
_7021
15389
K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase
no
0.82
7
mRNA
_6437
14805
K07511 ECHS1 enoyl-CoA hydratase
no
0.81
8
mRNA
_1089
9457
K01638 aceB, glcB malate synthase
no
0.81
9
mRNA
_5624
13992
KOG1611 Predicted short chain-type dehydrogenase
no
0.81
10
mRNA
_7007
15375
BLAST mitochondrial complex I protein Fmp36 [Aschersonia al...
no
0.81
11
mRNA
_2443
10811
HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113
no
0.81
12
mRNA
_3622
11990
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.80
13
mRNA
_1468
9836
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.79
14
mRNA
_7659
16027
BLAST acetylornithine transaminase [Moesziomyces antarc...
no
0.79
15
mRNA
_8081
16449
K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase
no
0.79
16
mRNA
_5815
14183
KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
no
0.79
17
mRNA
_5695
14063
K08869 ADCK, ABC1 aarF domain-containing kinase
no
0.79
18
mRNA
_2174
10542
K14009 BCAP31, BAP31 B-cell receptor-associated protein 31
no
0.78
19
mRNA
_8369
16737
HMMPfam-Transient receptor potential (TRP) ion channel-PF06011
no
0.78
20
mRNA
_4374
12742
K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase
no
0.78