Top cofit genes for mRNA_6548 from Rhodosporidium toruloides IFO0880

14916: K11592 DICER1, DCR1 endoribonuclease Dicer

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_6091	14459	KOG1515 Arylacetamide deacetylase	no	0.74
2	mRNA_7617	15985	Hypothetical Protein	no	0.71
3	mRNA_5369	13737	K03627 MBF1 putative transcription factor	no	0.68
4	mRNA_6281	14649	HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909	no	0.68
5	mRNA_1081	9449	Hypothetical Protein	no	0.66
6	mRNA_2705	11073	Hypothetical Protein	no	0.66
7	mRNA_6972	15340	K20279 SYNJ synaptojanin	no	0.66
8	mRNA_6992	15360	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.66
9	mRNA_4436	12804	Hypothetical Protein	no	0.66
10	mRNA_6564	14932	Hypothetical Protein	no	0.63
11	mRNA_2289	10657	KOG2454 Betaine aldehyde dehydrogenase	no	0.63
12	mRNA_5325	13693	HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266	no	0.62
13	mRNA_8390	16758	K00387 SUOX sulfite oxidase	no	0.61
14	mRNA_4591	12959	KOG0379 Kelch repeat-containing proteins	no	0.61
15	mRNA_8241	16609	Hypothetical Protein	no	0.61
16	mRNA_2238	10606	K20813 TDG thymine-DNA glycosylase	no	0.61
17	mRNA_1693	10061	HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383	no	0.61
18	mRNA_4728	13096	HMMPfam-CUE domain-PF02845,HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,ProSiteProfiles-CUE domain profile.-PS51140,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197	no	0.61
19	mRNA_267	8635	K03381 catA catechol 1,2-dioxygenase	no	0.61
20	mRNA_6452	14820	Hypothetical Protein	no	0.60