Top cofit genes for mRNA_6558 from Rhodosporidium toruloides IFO0880

14926: HMMPfam-Bacterial signalling protein N terminal repeat-PF03707

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_7004	15372	HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445	no	0.79
2	mRNA_2608	10976	Hypothetical Protein	no	0.78
3	mRNA_4198	12566	K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit	no	0.75
4	mRNA_1814	10182	K00858 ppnK, NADK NAD+ kinase	no	0.75
5	mRNA_687	9055	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.75
6	mRNA_6308	14676	K09326 OTX1 homeobox protein OTX1	no	0.74
7	mRNA_918	9286	K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8	no	0.74
8	mRNA_5232	13600	SUPERFAMILY--SSF52047	no	0.73
9	mRNA_7919	16287	K01489 cdd, CDA cytidine deaminase	no	0.72
10	mRNA_3924	12292	KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily)	no	0.72
11	mRNA_4995	13363	Hypothetical Protein	no	0.71
12	mRNA_403	8771	Hypothetical Protein	no	0.70
13	mRNA_7670	16038	Hypothetical Protein	no	0.69
14	mRNA_402	8770	BLAST N-terminal acetyltransferase catalytic subunit Nat1 [...	no	0.69
15	mRNA_7375	15743	HMMPfam-Chromosome segregation protein Csm1/Pcs1-PF12539	no	0.68
16	mRNA_7397	15765	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.68
17	mRNA_5246	13614	K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit	no	0.68
18	mRNA_8372	16740	KOG1729 FYVE finger containing protein	no	0.67
19	mRNA_2029	10397	K07088 K07088 uncharacterized protein	no	0.67
20	mRNA_3796	12164	Hypothetical Protein	no	0.66