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Cofit
Protein
Homologs
Top cofit genes for mRNA_6649 from
Rhodosporidium toruloides IFO0880
15017
:
K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6180
14548
KOG0218 Mismatch repair MSH3
no
0.85
2
mRNA
_3946
12314
K06176 truD, PUS7 tRNA pseudouridine13 synthase
no
0.84
3
mRNA
_2418
10786
HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445
no
0.80
4
mRNA
_963
9331
K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
no
0.80
5
mRNA
_6644
15012
HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744
no
0.80
6
mRNA
_8041
16409
K13350 PXMP4, PMP24 peroxisomal membrane protein 4
no
0.79
7
mRNA
_4727
13095
Hypothetical Protein
no
0.79
8
mRNA
_1596
9964
K14557 UTP6 U3 small nucleolar RNA-associated protein 6
no
0.79
9
mRNA
_8307
16675
Hypothetical Protein
no
0.78
10
mRNA
_2536
10904
K15601 KDM3 lysine-specific demethylase 3
no
0.78
11
mRNA
_7195
15563
KOG0519 Sensory transduction histidine kinase
no
0.78
12
mRNA
_1740
10108
K20828 ZNF143_76, STAF zinc finger protein 143/76
no
0.78
13
mRNA
_990
9358
Hypothetical Protein
no
0.77
14
mRNA
_5012
13380
K01886 QARS, glnS glutaminyl-tRNA synthetase
no
0.76
15
mRNA
_3327
11695
HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491
no
0.76
16
mRNA
_1618
9986
Hypothetical Protein
no
0.75
17
mRNA
_4192
12560
K04797 pfdA, PFDN5 prefoldin alpha subunit
no
0.75
18
mRNA
_6923
15291
Hypothetical Protein
no
0.74
19
mRNA
_7342
15710
Hypothetical Protein
no
0.73
20
mRNA
_698
9066
K12188 SNF8, EAP30 ESCRT-II complex subunit VPS22
no
0.73