Top cofit genes for mRNA_6661 from Rhodosporidium toruloides IFO0880

15029: K11699 RDR, RDRP RNA-dependent RNA polymerase

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6058 14426 SUPERFAMILY--SSF52047 no 0.72
2 mRNA_3776 12144 HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850 no 0.70
3 mRNA_6621 14989 Hypothetical Protein no 0.68
4 mRNA_2375 10743 Hypothetical Protein no 0.68
5 mRNA_5335 13703 HMMPfam-Domain of unknown function (DUF4202)-PF13875 no 0.68
6 mRNA_3845 12213 HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335 no 0.67
7 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.67
8 mRNA_3445 11813 HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041 no 0.67
9 mRNA_5115 13483 Hypothetical Protein no 0.66
10 mRNA_6844 15212 K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101 no 0.65
11 mRNA_2351 10719 Hypothetical Protein no 0.65
12 mRNA_3238 11606 BLAST RNA replication protein [Rhizoctonia solani] no 0.65
13 mRNA_3949 12317 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.65
14 mRNA_5699 14067 HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300 no 0.64
15 mRNA_2287 10655 KOG3870 Uncharacterized conserved protein no 0.64
16 mRNA_104 8472 Hypothetical Protein no 0.64
17 mRNA_4670 13038 Hypothetical Protein no 0.63
18 mRNA_5284 13652 Hypothetical Protein no 0.63
19 mRNA_3203 11571 Hypothetical Protein no 0.63
20 mRNA_6243 14611 Hypothetical Protein no 0.62