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Cofit
Protein
Homologs
Top cofit genes for mRNA_6728 from
Rhodosporidium toruloides IFO0880
15096
:
K14309 NUP93, NIC96 nuclear pore complex protein Nup93
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6259
14627
HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713
no
0.82
2
mRNA
_3865
12233
HMMPfam-DASH complex subunit Spc34-PF08657
no
0.81
3
mRNA
_3271
11639
K07126 K07126 uncharacterized protein
no
0.80
4
mRNA
_431
8799
HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833
no
0.77
5
mRNA
_3688
12056
KOG4285 Mitotic phosphoprotein
no
0.76
6
mRNA
_7195
15563
KOG0519 Sensory transduction histidine kinase
no
0.76
7
mRNA
_746
9114
KOG0143 Iron/ascorbate family oxidoreductases
no
0.76
8
mRNA
_3946
12314
K06176 truD, PUS7 tRNA pseudouridine13 synthase
no
0.76
9
mRNA
_672
9040
Hypothetical Protein
no
0.75
10
mRNA
_3600
11968
HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748
no
0.75
11
mRNA
_1665
10033
K03358 APC11 anaphase-promoting complex subunit 11
no
0.74
12
mRNA
_2536
10904
K15601 KDM3 lysine-specific demethylase 3
no
0.73
13
mRNA
_123
8491
Hypothetical Protein
no
0.73
14
mRNA
_3831
12199
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.73
15
mRNA
_4240
12608
KOG1700 Regulatory protein MLP and related LIM proteins
no
0.73
16
mRNA
_567
8935
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
no
0.72
17
mRNA
_4412
12780
SUPERFAMILY--SSF52047
no
0.72
18
mRNA
_7286
15654
K17508 PTC7, PPTC7 protein phosphatase PTC7
no
0.71
19
mRNA
_3749
12117
HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850
no
0.71
20
mRNA
_4910
13278
K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13
no
0.71