Top cofit genes for mRNA_6870 from Rhodosporidium toruloides IFO0880

15238: K08736 MSH3 DNA mismatch repair protein MSH3
SEED: DNA mismatch repair protein MutS

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4777	13145	Hypothetical Protein	no	0.78
2	mRNA_2720	11088	Hypothetical Protein	no	0.77
3	mRNA_1005	9373	K08794 CAMK1 calcium/calmodulin-dependent protein kinase I	no	0.75
4	mRNA_203	8571	SUPERFAMILY--SSF51197	no	0.74
5	mRNA_849	9217	HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047	no	0.73
6	mRNA_2941	11309	BLAST IncA domain protein [Rhizoctonia solani AG-3 Rhs1AP]	no	0.73
7	mRNA_1361	9729	Hypothetical Protein	no	0.72
8	mRNA_609	8977	K19001 HELLS, DDM1 ATP-dependent DNA helicase	no	0.72
9	mRNA_8428	16796	KOG3808 Uncharacterized conserved protein	no	0.71
10	mRNA_9	8377	Hypothetical Protein	no	0.70
11	mRNA_3828	12196	Hypothetical Protein	no	0.70
12	mRNA_5896	14264	K07573 CSL4, EXOSC1 exosome complex component CSL4	no	0.69
13	mRNA_5624	13992	KOG1611 Predicted short chain-type dehydrogenase	no	0.69
14	mRNA_2453	10821	HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180	no	0.68
15	mRNA_5083	13451	Hypothetical Protein	no	0.68
16	mRNA_6831	15199	HMMPfam-ATP synthase regulation protein NCA2-PF08637	no	0.66
17	mRNA_818	9186	HMMPfam-PQ loop repeat-PF04193	no	0.66
18	mRNA_2639	11007	HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445	no	0.66
19	mRNA_3988	12356	Hypothetical Protein	no	0.65
20	mRNA_8	8376	K01194 TREH, treA, treF alpha,alpha-trehalase	no	0.65