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Cofit
Protein
Homologs
Top cofit genes for mRNA_6893 from
Rhodosporidium toruloides IFO0880
15261
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_733
9101
K13954 yiaY alcohol dehydrogenase
no
0.78
2
mRNA
_6376
14744
K14811 DBP3 ATP-dependent RNA helicase DBP3
no
0.76
3
mRNA
_1379
9747
HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236
no
0.75
4
mRNA
_2433
10801
K10866 RAD50 DNA repair protein RAD50
no
0.75
5
mRNA
_6270
14638
KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase
no
0.75
6
mRNA
_7020
15388
K11446 KDM5, JARID1 histone demethylase JARID1
no
0.74
7
mRNA
_452
8820
SUPERFAMILY--SSF52047
no
0.73
8
mRNA
_1299
9667
K00600 glyA, SHMT glycine hydroxymethyltransferase
no
0.73
9
mRNA
_6642
15010
KOG2684 Sirtuin 5 and related class III sirtuins (SIR2 family)
no
0.72
10
mRNA
_7433
15801
K10356 MYO1 myosin I
no
0.72
11
mRNA
_2247
10615
Hypothetical Protein
no
0.71
12
mRNA
_3857
12225
Interpro Mysoin-binding motif of peroxisomes
no
0.71
13
mRNA
_3423
11791
KOG3655 Drebrins and related actin binding proteins
no
0.71
14
mRNA
_3619
11987
HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976
no
0.70
15
mRNA
_3284
11652
BLAST something about silencing, SAS, complex subunit 4 [Rh...
no
0.70
16
mRNA
_2192
10560
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.70
17
mRNA
_5921
14289
K14789 NOP6 nucleolar protein 6
no
0.70
18
mRNA
_4365
12733
HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920
no
0.69
19
mRNA
_3679
12047
K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3
no
0.69
20
mRNA
_4608
12976
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.69