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Cofit
Protein
Homologs
Top cofit genes for mRNA_6898 from
Rhodosporidium toruloides IFO0880
15266
:
HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1633
10001
HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473
no
0.81
2
mRNA
_7324
15692
K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase
no
0.80
3
mRNA
_5738
14106
SUPERFAMILY--SSF54928
no
0.80
4
mRNA
_539
8907
HMMPfam-Zinc finger, C2H2 type-PF00096,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157
no
0.78
5
mRNA
_3354
11722
KOG2395 Protein involved in vacuole import and degradation
no
0.78
6
mRNA
_2530
10898
K14634 TIGAR fructose-2,6-bisphosphatase
no
0.77
7
mRNA
_4623
12991
HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383
no
0.77
8
mRNA
_5586
13954
HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874
no
0.77
9
mRNA
_1883
10251
KOG2665 Predicted FAD-dependent oxidoreductase
no
0.76
10
mRNA
_2254
10622
K17822 DCUN1D1_2 DCN1-like protein 1/2
no
0.76
11
mRNA
_7591
15959
Hypothetical Protein
no
0.75
12
mRNA
_7421
15789
Hypothetical Protein
no
0.75
13
mRNA
_3623
11991
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.74
14
mRNA
_2105
10473
K17991 PXG peroxygenase
no
0.74
15
mRNA
_833
9201
HMMPfam-Homeobox domain-PF00046,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689
no
0.74
16
mRNA
_5274
13642
KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
no
0.74
17
mRNA
_4490
12858
KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.74
18
mRNA
_4215
12583
HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350
no
0.73
19
mRNA
_1650
10018
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.73
20
mRNA
_1266
9634
K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase
no
0.73