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Cofit
Protein
Homologs
Top cofit genes for mRNA_6949 from
Rhodosporidium toruloides IFO0880
15317
:
HMMPfam-Cenp-O kinetochore centromere component-PF09496
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_163
8531
Hypothetical Protein
no
0.82
2
mRNA
_7072
15440
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.80
3
mRNA
_385
8753
Hypothetical Protein
no
0.78
4
mRNA
_1067
9435
K01580 E4.1.1.15, gadB, gadA, GAD glutamate decarboxylase
no
0.76
5
mRNA
_4013
12381
HMMPfam-DJ-1/PfpI family-PF01965,HMMPfam-N-terminal domain of DJ-1_PfpI family-PF13587,SUPERFAMILY--SSF52317
no
0.75
6
mRNA
_6562
14930
K20353 SEC16 COPII coat assembly protein SEC16
no
0.75
7
mRNA
_4610
12978
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.75
8
mRNA
_4390
12758
K16261 YAT yeast amino acid transporter
no
0.74
9
mRNA
_4212
12580
KOG1968 Replication factor C, subunit RFC1 (large subunit)
no
0.74
10
mRNA
_5060
13428
HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756
no
0.74
11
mRNA
_6612
14980
Hypothetical Protein
no
0.73
12
mRNA
_7854
16222
HMMPfam-Fungal protein of unknown function (DUF2015)-PF09435
no
0.73
13
mRNA
_2251
10619
KOG3313 Molecular chaperone Prefoldin, subunit 3
no
0.72
14
mRNA
_1409
9777
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
no
0.72
15
mRNA
_4076
12444
K12486 SMAP stromal membrane-associated protein
no
0.72
16
mRNA
_2083
10451
K06276 PDPK1 3-phosphoinositide dependent protein kinase-1
no
0.72
17
mRNA
_743
9111
K08493 VTI1 vesicle transport through interaction with t-SNAREs 1
no
0.72
18
mRNA
_8366
16734
BLAST similar to An01g09190 [Aspergillus kawachii IFO 4308]
no
0.72
19
mRNA
_626
8994
K19423 epsE glycosyltransferase EpsE
no
0.72
20
mRNA
_4419
12787
K11121 SIR2 NAD-dependent histone deacetylase SIR2
no
0.71