Top cofit genes for mRNA_7111 from Rhodosporidium toruloides IFO0880

15479: Interpro Subunit 11 of the general transcription factor TFIIH

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_3309	11677	HMMPfam-Amidohydrolase family-PF01979,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556	no	0.83
2	mRNA_1361	9729	Hypothetical Protein	no	0.77
3	mRNA_8067	16435	K12399 AP3S AP-3 complex subunit sigma	no	0.75
4	mRNA_3099	11467	Hypothetical Protein	no	0.75
5	mRNA_8467	16835	Hypothetical Protein	no	0.74
6	mRNA_4499	12867	K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit	no	0.74
7	mRNA_1444	9812	KOG4173 Alpha-SNAP protein	no	0.74
8	mRNA_3441	11809	K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase	no	0.73
9	mRNA_2824	11192	BLAST expressed protein [Cryptococcus neoformans var. neofo...	no	0.73
10	mRNA_6386	14754	KOG3043 Predicted hydrolase related to dienelactone hydrolase	no	0.73
11	mRNA_7140	15508	KOG1029 Endocytic adaptor protein intersectin	no	0.71
12	mRNA_7087	15455	Hypothetical Protein	no	0.71
13	mRNA_849	9217	HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047	no	0.70
14	mRNA_3311	11679	K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase	no	0.70
15	mRNA_6996	15364	Hypothetical Protein	no	0.70
16	mRNA_2726	11094	K01725 cynS cyanate lyase	no	0.70
17	mRNA_5362	13730	Hypothetical Protein	no	0.69
18	mRNA_8215	16583	ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785	no	0.68
19	mRNA_8428	16796	KOG3808 Uncharacterized conserved protein	no	0.68
20	mRNA_5624	13992	KOG1611 Predicted short chain-type dehydrogenase	no	0.68