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Cofit
Protein
Homologs
Top cofit genes for mRNA_7279 from
Rhodosporidium toruloides IFO0880
15647
:
K13698 ABHD4 abhydrolase domain-containing protein 4
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1420
9788
KOG4269 Rac GTPase-activating protein BCR/ABR
no
0.85
2
mRNA
_8166
16534
BLAST receptor-activated Ca2+-permeable cation channel [Aur...
no
0.79
3
mRNA
_6915
15283
K01130 E3.1.6.1, aslA arylsulfatase
no
0.78
4
mRNA
_5342
13710
KOG0692 Pentafunctional AROM protein
no
0.77
5
mRNA
_5473
13841
KOG2226 Proteins containing regions of low-complexity
no
0.77
6
mRNA
_7159
15527
HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.76
7
mRNA
_1517
9885
HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229
no
0.74
8
mRNA
_133
8501
Hypothetical Protein
no
0.74
9
mRNA
_8217
16585
KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily
no
0.74
10
mRNA
_1223
9591
PRINTS-Proline rich extensin signature-PR01217
no
0.73
11
mRNA
_2293
10661
BLAST splicing arginine serine-rich 12 [Moesziomyces an...
no
0.73
12
mRNA
_4729
13097
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.72
13
mRNA
_5051
13419
KOG1382 Multiple inositol polyphosphate phosphatase
no
0.71
14
mRNA
_4022
12390
KOG2661 Peptidase family M48
no
0.71
15
mRNA
_1123
9491
K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP)
no
0.71
16
mRNA
_6831
15199
HMMPfam-ATP synthase regulation protein NCA2-PF08637
no
0.70
17
mRNA
_6046
14414
Hypothetical Protein
no
0.70
18
mRNA
_615
8983
HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784
no
0.70
19
mRNA
_2998
11366
KOG3383 Uncharacterized conserved protein
no
0.70
20
mRNA
_4618
12986
Hypothetical Protein
no
0.70