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Cofit
Protein
Homologs
Top cofit genes for mRNA_7632 from
Rhodosporidium toruloides IFO0880
16000
:
KOG0383 Predicted helicase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_3703
12071
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.76
2
mRNA
_69
8437
K03029 PSMD4, RPN10 26S proteasome regulatory subunit N10
no
0.75
3
mRNA
_3041
11409
KOG0252 Inorganic phosphate transporter
no
0.72
4
mRNA
_885
9253
K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12
no
0.69
5
mRNA
_7447
15815
HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995
no
0.68
6
mRNA
_1963
10331
K00767 nadC, QPRT nicotinate-nucleotide pyrophosphorylase (carboxylating)
no
0.67
7
mRNA
_2825
11193
HMMPfam-F-box-like-PF12937
no
0.67
8
mRNA
_7767
16135
ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896
no
0.66
9
mRNA
_1841
10209
KOG4476 Gluconate transport-inducing protein
no
0.64
10
mRNA
_1941
10309
KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily)
no
0.64
11
mRNA
_2267
10635
K15110 SLC25A21, ODC solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21
no
0.62
12
mRNA
_3560
11928
K06101 ASH1L histone-lysine N-methyltransferase ASH1L
no
0.62
13
mRNA
_1232
9600
K12177 COPS3, CSN3 COP9 signalosome complex subunit 3
no
0.62
14
mRNA
_7847
16215
KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily
no
0.61
15
mRNA
_1284
9652
K12897 TRA2 transformer-2 protein
no
0.61
16
mRNA
_1931
10299
KOG2112 Lysophospholipase
no
0.59
17
mRNA
_2837
11205
KOG4100 Uncharacterized conserved protein
no
0.59
18
mRNA
_4057
12425
Hypothetical Protein
no
0.58
19
mRNA
_1011
9379
Hypothetical Protein
no
0.58
20
mRNA
_2631
10999
K14803 PTC2_3 protein phosphatase PTC2/3
no
0.57