Top cofit genes for mRNA_7716 from Rhodosporidium toruloides IFO0880

16084: HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2495 10863 K03507 DPB11 DNA replication regulator DPB11 no 0.88
2 mRNA_7324 15692 K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase no 0.88
3 mRNA_1265 9633 K14861 URB1 nucleolar pre-ribosomal-associated protein 1 no 0.86
4 mRNA_2539 10907 Hypothetical Protein no 0.86
5 mRNA_6729 15097 HMMPfam-Putative GTPase activating protein for Arf-PF01412,PRINTS-HIV Rev interacting protein signature-PR00405,ProSiteProfiles-ARF GTPase-activating proteins domain profile.-PS50115,SMART-Putative GTP-ase activating proteins for the small GTPase, ARF-SM00105,SUPERFAMILY--SSF57863 no 0.81
6 mRNA_6004 14372 SUPERFAMILY--SSF52047 no 0.80
7 mRNA_2499 10867 BLAST secreted protein [Moniliophthora roreri MCA 2997] no 0.79
8 mRNA_6212 14580 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.79
9 mRNA_2254 10622 K17822 DCUN1D1_2 DCN1-like protein 1/2 no 0.78
10 mRNA_5463 13831 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.78
11 mRNA_1920 10288 Hypothetical Protein no 0.78
12 mRNA_2786 11154 Hypothetical Protein no 0.78
13 mRNA_3456 11824 HMMPfam-Family of unknown function (DUF500)-PF04366 no 0.77
14 mRNA_469 8837 KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain no 0.77
15 mRNA_503 8871 Hypothetical Protein no 0.76
16 mRNA_7548 15916 K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4 no 0.76
17 mRNA_3354 11722 KOG2395 Protein involved in vacuole import and degradation no 0.76
18 mRNA_2432 10800 K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20 no 0.75
19 mRNA_856 9224 KOG0828 Predicted E3 ubiquitin ligase no 0.75
20 mRNA_4913 13281 HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335 no 0.74