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Cofit
Protein
Homologs
Top cofit genes for mRNA_7786 from
Rhodosporidium toruloides IFO0880
16154
:
HMMPfam-Centromere-associated protein K-PF11802
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6331
14699
Hypothetical Protein
no
0.77
2
mRNA
_185
8553
K11874 UBP16 ubiquitin carboxyl-terminal hydrolase 16
no
0.73
3
mRNA
_8153
16521
HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626
no
0.73
4
mRNA
_8370
16738
K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2
no
0.70
5
mRNA
_7230
15598
K07019 K07019 uncharacterized protein
no
0.70
6
mRNA
_4484
12852
KOG2588 Predicted DNA-binding protein
no
0.70
7
mRNA
_2453
10821
HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180
no
0.68
8
mRNA
_8105
16473
Hypothetical Protein
no
0.66
9
mRNA
_2185
10553
HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879
no
0.66
10
mRNA
_6897
15265
Hypothetical Protein
no
0.64
11
mRNA
_2782
11150
HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
no
0.63
12
mRNA
_456
8824
Hypothetical Protein
no
0.63
13
mRNA
_3101
11469
K01490 AMPD AMP deaminase
no
0.63
14
mRNA
_2250
10618
HMMPfam-Apolipoprotein O-PF09769
no
0.63
15
mRNA
_1931
10299
KOG2112 Lysophospholipase
no
0.62
16
mRNA
_2146
10514
K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1
no
0.62
17
mRNA
_678
9046
Hypothetical Protein
no
0.62
18
mRNA
_2577
10945
HMMPfam-Protein of unknown function (DUF3767)-PF12597
no
0.62
19
mRNA
_4639
13007
KOG3469 Cytochrome c oxidase, subunit VIa/COX13
no
0.62
20
mRNA
_3399
11767
KOG0733 Nuclear AAA ATPase (VCP subfamily)
no
0.62