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Cofit
Protein
Homologs
Top cofit genes for mRNA_7978 from
Rhodosporidium toruloides IFO0880
16346
:
K13341 PEX7, PTS2R peroxin-7
SEED: High-affnity carbon uptake protein Hat/HatR
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5445
13813
K07513 ACAA1 acetyl-CoA acyltransferase 1
no
0.90
2
mRNA
_5137
13505
K13342 PEX5, PXR1 peroxin-5
no
0.90
3
mRNA
_595
8963
KOG0137 Very-long-chain acyl-CoA dehydrogenase
no
0.87
4
mRNA
_8410
16778
K12761 SNF1 carbon catabolite-derepressing protein kinase
no
0.87
5
mRNA
_1089
9457
K01638 aceB, glcB malate synthase
no
0.87
6
mRNA
_6437
14805
K07511 ECHS1 enoyl-CoA hydratase
no
0.85
7
mRNA
_5877
14245
K00624 E2.3.1.7 carnitine O-acetyltransferase
no
0.85
8
mRNA
_1850
10218
K00311 ETFDH electron-transferring-flavoprotein dehydrogenase
no
0.85
9
mRNA
_5654
14022
K01637 E4.1.3.1, aceA isocitrate lyase
no
0.85
10
mRNA
_5693
14061
KOG4186 Peroxisomal biogenesis protein (peroxin)
no
0.84
11
mRNA
_2835
11203
K00022 HADH 3-hydroxyacyl-CoA dehydrogenase
no
0.83
12
mRNA
_6441
14809
K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit
no
0.81
13
mRNA
_2443
10811
HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113
no
0.81
14
mRNA
_1676
10044
SUPERFAMILY--SSF81383
no
0.79
15
mRNA
_5624
13992
KOG1611 Predicted short chain-type dehydrogenase
no
0.79
16
mRNA
_305
8673
HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648
no
0.79
17
mRNA
_1961
10329
HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140
no
0.79
18
mRNA
_815
9183
K04555 UBE2G2, UBC7 ubiquitin-conjugating enzyme E2 G2
no
0.79
19
mRNA
_3622
11990
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.78
20
mRNA
_333
8701
Hypothetical Protein
no
0.78