Top cofit genes for mRNA_8232 from Rhodosporidium toruloides IFO0880

16600: K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4
KEGG: U6 snRNA-associated Sm-like protein LSm4

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1699 10067 K10751 CHAF1B chromatin assembly factor 1 subunit B no 0.82
2 mRNA_6696 15064 KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases no 0.81
3 mRNA_1350 9718 KOG3376 Uncharacterized conserved protein no 0.80
4 mRNA_4745 13113 K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4 no 0.78
5 mRNA_5082 13450 K10696 BRE1 E3 ubiquitin-protein ligase BRE1 no 0.77
6 mRNA_7072 15440 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.77
7 mRNA_4390 12758 K16261 YAT yeast amino acid transporter no 0.76
8 mRNA_4849 13217 HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176 no 0.76
9 mRNA_379 8747 HMMPfam-Inositolphosphorylceramide synthase subunit Kei1-PF08552 no 0.76
10 mRNA_5066 13434 KOG3170 Conserved phosducin-like protein no 0.75
11 mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase no 0.74
12 mRNA_505 8873 HMMPfam-ubiE/COQ5 methyltransferase family-PF01209,SUPERFAMILY--SSF53335 no 0.74
13 mRNA_5060 13428 HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756 no 0.74
14 mRNA_3251 11619 K19986 EXOC8, SEC84 exocyst complex component 8 no 0.73
15 mRNA_6049 14417 K08517 SEC22 vesicle transport protein SEC22 no 0.73
16 mRNA_7457 15825 Hypothetical Protein no 0.73
17 mRNA_2600 10968 HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839 no 0.73
18 mRNA_1543 9911 Hypothetical Protein no 0.72
19 mRNA_2554 10922 BLAST Amino acid/polyamine transporter I [Sporothrix insect... no 0.72
20 mRNA_1179 9547 K12611 DCP1B mRNA-decapping enzyme 1B no 0.72