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Cofit
Protein
Homologs
Top cofit genes for mRNA_8360 from
Rhodosporidium toruloides IFO0880
16728
:
K02739 PSMB7 20S proteasome subunit beta 2
SEED: proteasome subunit beta2 (EC 3.4.25.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_901
9269
SUPERFAMILY--SSF52266
no
0.81
2
mRNA
_8012
16380
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.80
3
mRNA
_3954
12322
KOG1426 FOG RCC1 domain
no
0.78
4
mRNA
_736
9104
K00034 gdh glucose 1-dehydrogenase
no
0.77
5
mRNA
_7517
15885
Hypothetical Protein
no
0.77
6
mRNA
_5768
14136
Hypothetical Protein
no
0.76
7
mRNA
_5503
13871
HMMPfam-Chitin synthase III catalytic subunit-PF12271
no
0.76
8
mRNA
_7200
15568
K14816 REI1 pre-60S factor REI1
no
0.75
9
mRNA
_4962
13330
Hypothetical Protein
no
0.74
10
mRNA
_4264
12632
Hypothetical Protein
no
0.74
11
mRNA
_3744
12112
KOG0955 PHD finger protein BR140/LIN-49
no
0.73
12
mRNA
_6792
15160
K14396 PABPN1, PABP2 polyadenylate-binding protein 2
no
0.73
13
mRNA
_246
8614
Hypothetical Protein
no
0.73
14
mRNA
_6267
14635
KOG1721 FOG Zn-finger
no
0.72
15
mRNA
_6288
14656
KOG0876 Manganese superoxide dismutase
no
0.72
16
mRNA
_3051
11419
Hypothetical Protein
no
0.72
17
mRNA
_7345
15713
K00264 GLT1 glutamate synthase (NADPH/NADH)
no
0.71
18
mRNA
_6783
15151
HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316
no
0.71
19
mRNA
_5419
13787
Interpro Cut8, nuclear proteasome tether protein
no
0.71
20
mRNA
_7249
15617
Hypothetical Protein
no
0.70