Top cofit genes for mRNA_8457 from Rhodosporidium toruloides IFO0880

16825: K02728 PSMA4 20S proteasome subunit alpha 3
SEED: proteasome subunit alpha3 (EC 3.4.25.1)

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1418 9786 HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520 no 0.89
2 mRNA_8304 16672 K01336 E3.4.21.48 cerevisin no 0.84
3 mRNA_3369 11737 KOG2659 LisH motif-containing protein no 0.84
4 mRNA_1574 9942 K06867 K06867 uncharacterized protein no 0.82
5 mRNA_988 9356 BLAST glycerol-3-phosphate O-acyltransferase [Sanghuangporu... no 0.82
6 mRNA_4908 13276 K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type no 0.81
7 mRNA_3497 11865 HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236 no 0.80
8 mRNA_4361 12729 K10576 UBE2H, UBC8 ubiquitin-conjugating enzyme E2 H no 0.80
9 mRNA_5664 14032 K01262 pepP Xaa-Pro aminopeptidase no 0.80
10 mRNA_4186 12554 KOG2806 Chitinase no 0.79
11 mRNA_6531 14899 K19940 SEC2 Rab guanine nucleotide exchange factor SEC2 no 0.79
12 mRNA_3275 11643 BLAST methyltransferase [Obba rivulosa] no 0.78
13 mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.78
14 mRNA_3920 12288 K12767 RIM15 serine/threonine-protein kinase RIM15 no 0.78
15 mRNA_6952 15320 K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48 no 0.78
16 mRNA_3800 12168 K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9 no 0.78
17 mRNA_6359 14727 KOG1812 Predicted E3 ubiquitin ligase no 0.78
18 mRNA_7827 16195 KOG4680 Uncharacterized conserved protein, contains ML domain no 0.78
19 mRNA_3420 11788 HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091 no 0.78
20 mRNA_4182 12550 K13288 orn, REX2, REXO2 oligoribonuclease no 0.77