Top cofit genes for mRNA_29 from Rhodosporidium toruloides IFO0880

8397: HMMPfam-Swi5-PF07061

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_3451	11819	HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701	no	0.78
2	mRNA_2947	11315	Hypothetical Protein	no	0.76
3	mRNA_8383	16751	Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3	no	0.74
4	mRNA_7261	15629	SUPERFAMILY--SSF51735	no	0.71
5	mRNA_2833	11201	KOG0254 Predicted transporter (major facilitator superfamily)	no	0.71
6	mRNA_3280	11648	Hypothetical Protein	no	0.71
7	mRNA_7887	16255	HMMPfam-Uncharacterized conserved protein (DUF2183)-PF09949	no	0.70
8	mRNA_3147	11515	Hypothetical Protein	no	0.70
9	mRNA_1343	9711	K00698 CHS1 chitin synthase	no	0.69
10	mRNA_2503	10871	SUPERFAMILY--SSF63829	no	0.69
11	mRNA_7436	15804	Hypothetical Protein	no	0.68
12	mRNA_5040	13408	K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2	no	0.68
13	mRNA_284	8652	K01762 ACS 1-aminocyclopropane-1-carboxylate synthase	no	0.68
14	mRNA_5471	13839	KOG4696 Uncharacterized conserved protein	no	0.68
15	mRNA_1722	10090	KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily	no	0.68
16	mRNA_2427	10795	Hypothetical Protein	no	0.68
17	mRNA_3136	11504	KOG2615 Permease of the major facilitator superfamily	no	0.67
18	mRNA_7079	15447	Hypothetical Protein	no	0.67
19	mRNA_3928	12296	HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486	no	0.67
20	mRNA_4193	12561	Hypothetical Protein	no	0.67