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Cofit
Protein
Homologs
Top cofit genes for mRNA_64 from
Rhodosporidium toruloides IFO0880
8432
:
HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6749
15117
Hypothetical Protein
no
0.78
2
mRNA
_4579
12947
KOG1399 Flavin-containing monooxygenase
no
0.77
3
mRNA
_5699
14067
HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300
no
0.75
4
mRNA
_3811
12179
Hypothetical Protein
no
0.73
5
mRNA
_2594
10962
K12200 PDCD6IP, ALIX, RIM20 programmed cell death 6-interacting protein
no
0.71
6
mRNA
_2307
10675
HMMPfam-Mitochondrial ATPase inhibitor, IATP-PF04568,SUPERFAMILY--SSF64602
no
0.70
7
mRNA
_2913
11281
K13703 ABHD11 abhydrolase domain-containing protein 11
no
0.70
8
mRNA
_4956
13324
HMMPfam-SMI1 / KNR4 family (SUKH-1)-PF09346
no
0.69
9
mRNA
_6058
14426
SUPERFAMILY--SSF52047
no
0.69
10
mRNA
_2109
10477
SUPERFAMILY--SSF56112
no
0.69
11
mRNA
_3756
12124
HMMPfam-Protein of unknown function (DUF2665)-PF11654
no
0.68
12
mRNA
_3957
12325
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.67
13
mRNA
_8010
16378
K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial
no
0.67
14
mRNA
_3079
11447
HMMPfam-DNA polymerase Ligase (LigD)-PF13298
no
0.66
15
mRNA
_4627
12995
K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4
no
0.65
16
mRNA
_6514
14882
KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
no
0.65
17
mRNA
_5824
14192
Hypothetical Protein
no
0.65
18
mRNA
_480
8848
ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689
no
0.65
19
mRNA
_3879
12247
Interpro Selenoprotein SelK_SelG
no
0.65
20
mRNA
_5436
13804
Hypothetical Protein
no
0.64