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Cofit
Protein
Homologs
Top cofit genes for mRNA_70 from
Rhodosporidium toruloides IFO0880
8438
:
HMMPfam-Membrane-associating domain-PF01284
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5024
13392
K11124 SMG6, EST1A protein SMG6
no
0.78
2
mRNA
_8286
16654
HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716
no
0.75
3
mRNA
_6125
14493
KOG1477 SPRY domain-containing proteins
no
0.74
4
mRNA
_1136
9504
Hypothetical Protein
no
0.74
5
mRNA
_7156
15524
K20102 YTHDF YTH domain-containing family protein
no
0.73
6
mRNA
_6389
14757
HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112
no
0.73
7
mRNA
_6839
15207
K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1
no
0.73
8
mRNA
_3766
12134
K20372 TBC1D20, GYP8 TBC1 domain family member 20
no
0.72
9
mRNA
_87
8455
BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous]
no
0.72
10
mRNA
_6461
14829
Hypothetical Protein
no
0.72
11
mRNA
_7876
16244
HMMPfam-Protein of unknown function (DUF4246)-PF14033
no
0.72
12
mRNA
_3674
12042
K00128 ALDH aldehyde dehydrogenase (NAD+)
no
0.71
13
mRNA
_706
9074
BLAST Myelin gene regulatory factor [Chaetura pelagica]
no
0.71
14
mRNA
_1571
9939
K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB
no
0.71
15
mRNA
_3437
11805
K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3
no
0.71
16
mRNA
_3107
11475
K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2
no
0.71
17
mRNA
_6585
14953
K14850 RRP8 ribosomal RNA-processing protein 8
no
0.71
18
mRNA
_6057
14425
Hypothetical Protein
no
0.71
19
mRNA
_5560
13928
BLAST PROTEIN D2013.6 [Ceraceosorus bombacis]
no
0.71
20
mRNA
_4508
12876
KOG2263 Methionine synthase II (cobalamin-independent)
no
0.70